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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4529127 chr4:118341442 A/G C15orf21 chr15:45803334-45848928:+ 0.32 5.88 7.6E-9 Box Plot
THCA rs4531652 chr14:39823783 G/T LOC647288 chr13:75811890-75814517:- 0.47 8.46 3.22E-16 Box Plot
THCA rs4533720 chr4:164959804 A/G FOXJ2 chr12:8185299-8208099:+ -0.24 -5.88 7.82E-9 Box Plot
THCA rs4533899 chr5:46091291 C/T LOC647121 chr1:121260910-121313686:+ -0.38 -8.16 3.0E-15 Box Plot
THCA rs4535159 chr22:24007416 G/A IGLL3 chr22:25713888-25716191:+ 0.71 10.08 8.63E-22 Box Plot
THCA rs4535456 chr5:49679978 G/A LOC647121 chr1:121260910-121313686:+ 0.37 7.88 2.3E-14 Box Plot
THCA rs453592 chr21:43999983 T/C TLN1 chr9:35696945-35732392:- 0.22 6.04 3.02E-9 Box Plot
THCA rs4538933 chr8:10300964 A/G SGK223 chr8:8175258-8244008:- 0.38 6.17 1.44E-9 Box Plot
THCA rs4541665 chr5:45796546 G/T LOC647121 chr1:121260910-121313686:+ -0.37 -7.66 1.03E-13 Box Plot
THCA rs4541666 chr5:45857129 C/A LOC647121 chr1:121260910-121313686:+ 0.38 8.02 7.98E-15 Box Plot
THCA rs4541667 chr5:46060869 A/G LOC647121 chr1:121260910-121313686:+ 0.38 7.97 1.16E-14 Box Plot
THCA rs4545055 chr8:10935366 T/C SGK223 chr8:8175258-8244008:- 0.44 8.65 8.11E-17 Box Plot
THCA rs4546067 chr20:1438230 C/T FKBP1AP1 chr19:58337829-58338146:- 0.39 6.5 2.05E-10 Box Plot
THCA rs4546107 chr3:125776173 G/T ROPN1 chr3:123687368-123711025:- -0.33 -6.01 3.73E-9 Box Plot
THCA rs454849 chr21:44001064 T/C TLN1 chr9:35696945-35732392:- 0.22 6.19 1.32E-9 Box Plot